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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135941327_135942498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135941327 - 135942498

Intron Length:

1172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

ACCTTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

CATTTCTTACAT

Flanking Amino Acid:

NESGDMQNVTGAVSPLAEEQ

Intron Amino Acid Position:

813

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

87.9

29.3

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

80.4

0.68

0.8

77.2

35.4

Minor 5ss

49.8

-0

2.8

73.2

43.7

Minor BPS

0.33

1.8

73.75

Associated Gene:

Gene:

ATM

Ensembl Gene ID:

ENSAPLG00000012735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013383

135924607 - 135988698

64092

ENSAPLT00000044189

135941145 - 135951975

10831