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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135942699_135943232_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135942699 - 135943232

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TCTTTTTTTGTT

Flanking Amino Acid:

DSAKPLHLHTYLVLLKELPT

Intron Amino Acid Position:

880

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

72.6

38.9

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

80.5

0.69

0.8

73.4

37.1

Minor 5ss

31.3

-2.1

3.3

40.9

45.3

Minor BPS

41.4

-0.5

3.5

70.31

42.1

Associated Gene:

Gene:

ATM

Ensembl Gene ID:

ENSAPLG00000012735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013383

135924607 - 135988698

64092

ENSAPLT00000044189

135941145 - 135951975

10831