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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135949143_135949742_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135949143 - 135949742

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCAGTT

5'SS Class:

major

3'SS Sequence:

TTTCCTCCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TGTTTCTTACTA

Flanking Amino Acid:

LKDEDCLGKQEIDNLSHNNL

Intron Amino Acid Position:

1255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.2

69.9

41.1

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

81.6

0.71

0.7

74.4

30.8

Minor 5ss

40.5

-1.1

3.8

64.3

47.2

Minor BPS

66.9

0.53

1.6

75.34

36.5

Associated Gene:

Gene:

ATM

Ensembl Gene ID:

ENSAPLG00000012735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044189

135941145 - 135951975

10831

ENSAPLT00000013383

135924607 - 135988698

64092