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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135949859_135950792_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135949859 - 135950792

Intron Length:

934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTCATTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTTATTCATT

Flanking Amino Acid:

AEGSHLSKYIGELDPSPNPP

Intron Amino Acid Position:

1293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

81.8

38.5

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

83.6

0.76

0.9

82.1

34.5

Minor 5ss

39.8

-1.1

3.2

51.2

45.5

Minor BPS

54.1

0.21

77.76

38.8

Associated Gene:

Gene:

ATM

Ensembl Gene ID:

ENSAPLG00000012735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044189

135941145 - 135951975

10831

ENSAPLT00000013383

135924607 - 135988698

64092