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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135952470_135954508_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135952470 - 135954508

Intron Length:

2039

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTTCTG

5'SS Class:

major

3'SS Sequence:

TTTTTATGTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTCTTTCATT

Flanking Amino Acid:

AVDQPKIQQQVLGLLKYLVI

Intron Amino Acid Position:

1460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

65.5

45.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.2

0.81

0.9

85.4

34.1

Minor 5ss

36.5

-1.5

3.3

49.6

46.6

Minor BPS

66.9

0.61

1.7

82.98

39.3

Associated Gene:

Gene:

ATM

Ensembl Gene ID:

ENSAPLG00000012735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013383

135924607 - 135988698

64092