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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135958489_135959129_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135958489 - 135959129

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTCTT

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTGCAATATAT

Flanking Amino Acid:

LQPFRMSRKKFFELPTNNSE

Intron Amino Acid Position:

1696

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

74.8

41.3

Major BPS

79.2

0.73

75.3

39.4

Major PPT

88.2

0.86

0.6

81.7

30.3

Minor 5ss

39.2

-1.2

3.3

59.3

45.1

Minor BPS

44.8

-0.3

2.2

71.65

44.5

Associated Gene:

Gene:

ATM

Ensembl Gene ID:

ENSAPLG00000012735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013383

135924607 - 135988698

64092