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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135962836_135963517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135962836 - 135963517

Intron Length:

682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATATG

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTAAT

U12 Branch Point Sequence:

AGAGAGGTAATT

Flanking Amino Acid:

KSKETGISLQDLLMDIYKSI

Intron Amino Acid Position:

1920

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

76.8

38.2

Major BPS

60.4

0.26

1.3

61.4

43.2

Major PPT

76.7

0.6

0.9

69.1

41.8

Minor 5ss

44.8

-0.6

2.7

59.2

45.4

Minor BPS

36.9

-0.9

2.5

52.59

42.4

Associated Gene:

Gene:

ATM

Ensembl Gene ID:

ENSAPLG00000012735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013383

135924607 - 135988698

64092