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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135966017_135966553_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135966017 - 135966553

Intron Length:

537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTAAATCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TCTCTGTTAAAT

Flanking Amino Acid:

SAFYDILKDARVNEVEELCR

Intron Amino Acid Position:

2064

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

62.6

0.28

40.1

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

51.8

0.13

2.1

74.05

42.7

Associated Gene:

Gene:

ATM

Ensembl Gene ID:

ENSAPLG00000012735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013383

135924607 - 135988698

64092