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Intron Name: Anas_platyrhynchos_platyrhynchos_1_136052036_136062915_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

136052036 - 136062915

Intron Length:

10880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATGTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

TTAAAAATAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

77.6

33.1

Major BPS

65.7

0.39

71.3

30.3

Major PPT

88.1

0.86

0.6

81.5

30.4

Minor 5ss

38.5

-1.3

3.4

55.5

48.6

Minor BPS

44.2

-0.3

2.1

67.15

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018013

136036018 - 136063051

27034