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Intron Name: Anas_platyrhynchos_platyrhynchos_1_136221799_136263923_F


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
136221799 - 136263923

Intron Length:
42125

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGACTT

5'SS Class:
strong_major

3'SS Sequence:
TGTCACCTGACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTAAT

U12 Branch Point Sequence:
CCTGTCTTAATA

Flanking Amino Acid:
RREARNKNAEVEDETVAVLA

Intron Amino Acid Position:
768

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
92.3
1
0.8
84.6
33.3

Major BPS
87
0.92
0.9
86.2
29.1

Major PPT
67.3
0.39
1
61.5
39.8

Minor 5ss
37.9
-1.4
3.3
56.5
47.6

Minor BPS
63.7
0.43
1.4
65.77
41.9

Associated Gene:

Gene:
DDX10

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

136096003 - 136275823
179821