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Intron Name: Anas_platyrhynchos_platyrhynchos_1_136640671_136658235_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

136640671 - 136658235

Intron Length:

17565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTAAGAT

U12 Branch Point Sequence:

AGATGTGTAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

1.2

87.9

29.3

Major BPS

49.8

-0

1.3

49.1

44.8

Major PPT

84.2

0.77

0.8

81.4

30.7

Minor 5ss

41.5

-0.9

2.9

58.8

45.7

Minor BPS

45.7

-0.3

2.3

58.01

40.9

Associated Gene:

Gene:

ZC3H12C

Ensembl Gene ID:

ENSAPLG00000002854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027768

136640216 - 136679502

39287

ENSAPLT00000024144

136639712 - 136678556

38845