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Intron Name: Anas_platyrhynchos_platyrhynchos_1_136652914_136658235_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

136652914 - 136658235

Intron Length:

5322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTAAGAT

U12 Branch Point Sequence:

AGATGTGTAACC

Flanking Amino Acid:

MSVCFPANEYGTLYIQEY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.2

87.1

Major BPS

49.8

-0

1.3

49.1

44.8

Major PPT

84.2

0.77

0.8

81.4

30.7

Minor 5ss

40.7

-1

2.8

50.6

39.2

Minor BPS

45.7

-0.3

2.3

58.01

40.9

Associated Gene:

Gene:

ZC3H12C

Ensembl Gene ID:

ENSAPLG00000002854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023906

136652890 - 136678556

25667