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Intron Name: Anas_platyrhynchos_platyrhynchos_1_136659003_136671388_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

136659003 - 136671388

Intron Length:

12386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGAC

5'SS Class:

strong_major

3'SS Sequence:

ATGTGTGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AGTCATATAACA

Flanking Amino Acid:

IVIDGSNVAMSHGNKEVFSC

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.5

30.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.7

0.53

69.7

45.4

Minor 5ss

39.1

-1.2

3.1

51.5

45.7

Minor BPS

48.9

-0

1.8

62.53

36.7

Associated Gene:

Gene:

ZC3H12C

Ensembl Gene ID:

ENSAPLG00000002854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002888

136653908 - 136678556

24649

ENSAPLT00000024905

136639602 - 136678556

38955

ENSAPLT00000024144

136639712 - 136678556

38845

ENSAPLT00000038137

136655852 - 136678556

22705

ENSAPLT00000023906

136652890 - 136678556

25667

ENSAPLT00000027768

136640216 - 136679502

39287

ENSAPLT00000020193

136640172 - 136679502

39331

ENSAPLT00000025085

136638040 - 136678556

40517