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Intron Name: Anas_platyrhynchos_platyrhynchos_1_136671529_136674617_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

136671529 - 136674617

Intron Length:

3089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

GTATTCCTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGACCTTTAATT

Flanking Amino Acid:

EQSRPDALITDQEILRKLEK

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.1

0.59

0.9

70.5

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

71.4

0.75

1.2

79.22

36.7

Associated Gene:

Gene:

ZC3H12C

Ensembl Gene ID:

ENSAPLG00000002854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023906

136652890 - 136678556

25667

ENSAPLT00000027768

136640216 - 136679502

39287

ENSAPLT00000020193

136640172 - 136679502

39331

ENSAPLT00000025085

136638040 - 136678556

40517

ENSAPLT00000002888

136653908 - 136678556

24649

ENSAPLT00000024905

136639602 - 136678556

38955

ENSAPLT00000024144

136639712 - 136678556

38845

ENSAPLT00000038137

136655852 - 136678556

22705