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Intron Name: Anas_platyrhynchos_platyrhynchos_1_136674853_136675839_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

136674853 - 136675839

Intron Length:

987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCTTTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAG

U12 Branch Point Sequence:

GCTTCCGTAACA

Flanking Amino Acid:

RLLMYSFVNDKFMPPDDPLG

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

80.7

33.7

Major BPS

45.6

-0.2

1.5

53.6

38.7

Major PPT

0.65

0.9

72.9

37.5

Minor 5ss

37.6

-1.4

50.5

Minor BPS

65.4

0.48

2.1

75.93

41.5

Associated Gene:

Gene:

ZC3H12C

Ensembl Gene ID:

ENSAPLG00000002854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027768

136640216 - 136679502

39287

ENSAPLT00000023906

136652890 - 136678556

25667

ENSAPLT00000025085

136638040 - 136678556

40517

ENSAPLT00000020193

136640172 - 136679502

39331

ENSAPLT00000024905

136639602 - 136678556

38955

ENSAPLT00000002888

136653908 - 136678556

24649

ENSAPLT00000024144

136639712 - 136678556

38845

ENSAPLT00000038137

136655852 - 136678556

22705