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Intron Name: Anas_platyrhynchos_platyrhynchos_1_136688343_136699411_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

136688343 - 136699411

Intron Length:

11069

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGAGCT

5'SS Class:

major

3'SS Sequence:

TCTTTCTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

ATCTCCTTGACT

Flanking Amino Acid:

TKQRIDEFEAMLQKYDLLQP

Intron Amino Acid Position:

583

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

70.7

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

84.3

0.77

0.8

80.4

31.6

Minor 5ss

30.1

-2.3

3.5

44.3

43.3

Minor BPS

82.8

1.11

89.64

34.6

Associated Gene:

Gene:

RDX

Ensembl Gene ID:

ENSAPLG00000002864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048428

136687631 - 136731535

43905