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Intron Name: Anas_platyrhynchos_platyrhynchos_1_136702286_136705638_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

136702286 - 136705638

Intron Length:

3353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGAATC

5'SS Class:

major

3'SS Sequence:

GCTTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TAGTATTGAACT

Flanking Amino Acid:

ADQMKNQEQLAAELAEFTAK

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

74.4

33.9

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

82.8

0.74

0.9

80.2

37.3

Minor 5ss

39.9

-1.1

3.1

54.7

37.4

Minor BPS

59.2

0.37

1.6

75.22

41.1

Associated Gene:

Gene:

RDX

Ensembl Gene ID:

ENSAPLG00000002864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020220

136684060 - 136731535

47476

ENSAPLT00000002962

136692642 - 136731475

38834

ENSAPLT00000048428

136687631 - 136731535

43905

ENSAPLT00000042612

136698692 - 136731535

32844

ENSAPLT00000040628

136697159 - 136731535

34377