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Intron Name: Anas_platyrhynchos_platyrhynchos_1_136705800_136708538_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

136705800 - 136708538

Intron Length:

2739

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTATGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACCAT

U12 Branch Point Sequence:

TTGTCTGCAAAC

Flanking Amino Acid:

IEEQTMKAQKELEEQTRRAL

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.5

33.5

Major BPS

57.8

0.19

1.3

67.1

39.2

Major PPT

72.7

0.51

69.5

35.4

Minor 5ss

-1

56.7

47.6

Minor BPS

46.7

-0.2

2.2

63.52

42.2

Associated Gene:

Gene:

RDX

Ensembl Gene ID:

ENSAPLG00000002864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040628

136697159 - 136731535

34377

ENSAPLT00000020220

136684060 - 136731535

47476

ENSAPLT00000002962

136692642 - 136731475

38834

ENSAPLT00000048428

136687631 - 136731535

43905

ENSAPLT00000042612

136698692 - 136731535

32844