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Intron Name: Anas_platyrhynchos_platyrhynchos_1_136708670_136709302_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

136708670 - 136709302

Intron Length:

633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTAAC

5'SS Class:

strong_major

3'SS Sequence:

GTATTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAA

U12 Branch Point Sequence:

TTGAGATTAAAA

Flanking Amino Acid:

REEKHQKQLERAQLENEKKK

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

83.3

28.2

Major BPS

64.3

0.36

71.3

30.3

Major PPT

0.7

0.9

77.9

40.2

Minor 5ss

36.1

-1.6

2.7

45.4

42.7

Minor BPS

47.2

-0.2

2.1

62.76

42.9

Associated Gene:

Gene:

RDX

Ensembl Gene ID:

ENSAPLG00000002864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020220

136684060 - 136731535

47476

ENSAPLT00000002962

136692642 - 136731475

38834

ENSAPLT00000048428

136687631 - 136731535

43905

ENSAPLT00000042612

136698692 - 136731535

32844

ENSAPLT00000040628

136697159 - 136731535

34377