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Intron Name: Anas_platyrhynchos_platyrhynchos_1_136709467_136710092_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

136709467 - 136710092

Intron Length:

626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

ATTATTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TATGCTGCAATT

Flanking Amino Acid:

VIKPIDKKAPDFVFYAPRLR

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

84.8

32.5

Major BPS

81.8

0.79

1.1

34.5

Major PPT

81.5

0.71

0.8

74.1

40.8

Minor 5ss

38.9

-1.3

2.8

53.8

42.8

Minor BPS

46.6

-0.1

2.2

68.76

42.9

Associated Gene:

Gene:

RDX

Ensembl Gene ID:

ENSAPLG00000002864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002962

136692642 - 136731475

38834

ENSAPLT00000048428

136687631 - 136731535

43905

ENSAPLT00000042612

136698692 - 136731535

32844

ENSAPLT00000040628

136697159 - 136731535

34377

ENSAPLT00000020220

136684060 - 136731535

47476