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Intron Name: Anas_platyrhynchos_platyrhynchos_1_136710190_136711643_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

136710190 - 136711643

Intron Length:

1454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTCTTTTAATG

Flanking Amino Acid:

LGLNIYEHDDKLTPKIGFPW

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

73.6

37.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.1

0.7

0.9

25.8

Minor 5ss

34.7

-1.7

3.2

43.8

Minor BPS

63.4

0.28

1.3

63.63

39.2

Associated Gene:

Gene:

RDX

Ensembl Gene ID:

ENSAPLG00000002864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002962

136692642 - 136731475

38834

ENSAPLT00000048428

136687631 - 136731535

43905

ENSAPLT00000042612

136698692 - 136731535

32844

ENSAPLT00000040628

136697159 - 136731535

34377

ENSAPLT00000020220

136684060 - 136731535

47476