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Intron Name: Anas_platyrhynchos_platyrhynchos_1_136767479_136768705_F

Intron Information:

Intron Rank:

150462

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

136767479 - 136768705

Intron Length:

1227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGCCAAAA

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGAAAT

U12 Branch Point Sequence:

AACAGCTTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.1

0.14

1.2

55.4

39.4

Major BPS

54.8

0.12

1.3

62.7

40.5

Major PPT

0.99

0.5

88.9

28.2

Minor 5ss

32.3

-2

3.1

39.9

45.9

Minor BPS

45.9

-0.2

59.84

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030875

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019875

136764501 - 136769155

4655