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Intron Name: Anas_platyrhynchos_platyrhynchos_1_136812704_136816879_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

136812704 - 136816879

Intron Length:

4176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAATAAA

5'SS Class:

major

3'SS Sequence:

CAGGAGCAGGGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAAGAA

U12 Branch Point Sequence:

GGATTAAGAACC

Flanking Amino Acid:

VTLFCLLWMPSVFTLSDGDS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

70.6

34.9

Major BPS

58.2

0.21

1.1

55.4

40.4

Major PPT

38.8

-0.6

1.6

28.1

36.4

Minor 5ss

36.6

-1.5

2.9

47.3

42.4

Minor BPS

43.2

-0.5

1.9

52.34

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003938

136810161 - 136816933

6773