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Intron Name: Anas_platyrhynchos_platyrhynchos_1_136815182_136815948_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

136815182 - 136815948

Intron Length:

767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAC

U12 Branch Point Sequence:

CTCTCTGCCATT

Flanking Amino Acid:

PDMESEFTKKISSLVQFLTE

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.5

35.6

Major BPS

54.8

0.12

1.1

46.8

37.9

Major PPT

81.5

0.71

0.9

76.2

37.8

Minor 5ss

29.3

-2.4

3.5

40.3

46.1

Minor BPS

40.3

-0.6

2.4

58.73

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003944

136811370 - 136818710

7341