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Intron Name: Anas_platyrhynchos_platyrhynchos_1_13700786_13701778_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
13700786 - 13701778

Intron Length:
993

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGAATT

5'SS Class:
strong_major

3'SS Sequence:
GTGCAATCTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAATTAA

U12 Branch Point Sequence:
ATTTCAGTAAAA

Flanking Amino Acid:
GKGDLEEYGQANLSFSDGDL

Intron Amino Acid Position:
463

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.9
0.87
0.8
86.3
29

Major BPS
58.9
0.22
1
50.1
34.6

Major PPT
64
0.32
1
59.6
41.6

Minor 5ss
45.5
-0.5
2.9
66.2
44.9

Minor BPS
50.4
0.01
2.3
72.59
38.8

Associated Gene:

Gene:
NAMPT

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13700549 - 13727290
26742