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Intron Name: Anas_platyrhynchos_platyrhynchos_1_13702190_13704967_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
13702190 - 13704967

Intron Length:
2778

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGAAC

5'SS Class:
strong_major

3'SS Sequence:
TTTTTATTATTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTTATTATTA

Flanking Amino Acid:
TLQEGLLVEQIVEGMKKNKW

Intron Amino Acid Position:
371

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.1
0.97
0.8
82.1
31

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
82.1
0.72
0.8
83.2
32.1

Minor 5ss
32.6
-2
3.1
42.1
45

Minor BPS
59.9
0.31
1.8
75.92
35.5

Associated Gene:

Gene:
NAMPT

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13700549 - 13727290
26742

13695672 - 13727290
31619

13691236 - 13727290
36055