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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137058685_137058853_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

137058685 - 137058853

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGATAT

5'SS Class:

strong_major

3'SS Sequence:

TGCAGTCCCCAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

TAGAACTCACAA

Flanking Amino Acid:

FRNNSSLSWLKHPEVRLEEE

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

0.9

75.6

29.3

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

0.07

1.1

48.9

39.6

Minor 5ss

34.3

-1.8

3.2

44.1

44.7

Minor BPS

40.6

-0.7

1.9

48.31

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004095

137053885 - 137067939

14055