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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137071225_137071805_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137071225 - 137071805

Intron Length:

581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTAATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATGTGTTTAATG

Flanking Amino Acid:

FPDGTIVRVQRDGSKTIEFN

Intron Amino Acid Position:

1206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

79.1

37.5

Major BPS

81.8

0.79

1.1

34.5

Major PPT

72.7

0.51

67.2

42.9

Minor 5ss

0.04

2.8

74.4

41.8

Minor BPS

56.7

0.07

1.8

60.93

Associated Gene:

Gene:

CENPJ

Ensembl Gene ID:

ENSAPLG00000004962

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022078

137071032 - 137086603

15572

ENSAPLT00000005118

137063995 - 137086603

22609