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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137071927_137072024_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137071927 - 137072024

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

AAATACATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATTTATGTAATA

Flanking Amino Acid:

EVLQFSNGQIEKHYPDGKKE

Intron Amino Acid Position:

1166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

88.7

0.96

0.8

36.5

Major PPT

66.1

0.36

60.4

44.5

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

51.8

0.05

2.1

70.28

36.3

Associated Gene:

Gene:

CENPJ

Ensembl Gene ID:

ENSAPLG00000004962

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022078

137071032 - 137086603

15572

ENSAPLT00000005118

137063995 - 137086603

22609