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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137072555_137073234_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137072555 - 137073234

Intron Length:

680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GGTGTCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TTATGCTTATAT

Flanking Amino Acid:

LEDSSRTFMVDSSPNEALVP

Intron Amino Acid Position:

1058

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

0.9

80.7

31.6

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

71.9

0.49

66.8

43.8

Minor 5ss

40.5

-1.1

3.4

59.8

Minor BPS

54.6

0.22

2.1

78.23

43.6

Associated Gene:

Gene:

CENPJ

Ensembl Gene ID:

ENSAPLG00000004962

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005118

137063995 - 137086603

22609

ENSAPLT00000022078

137071032 - 137086603

15572