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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137076284_137077152_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137076284 - 137077152

Intron Length:

869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTATAATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TGTTTTATAATT

Flanking Amino Acid:

EEREHALASIRKEIADFQQQ

Intron Amino Acid Position:

856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

81.1

0.7

0.9

74.3

39.2

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

64.2

0.52

1.5

80.97

34.8

Associated Gene:

Gene:

CENPJ

Ensembl Gene ID:

ENSAPLG00000004962

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022078

137071032 - 137086603

15572

ENSAPLT00000005118

137063995 - 137086603

22609