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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137082017_137083787_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137082017 - 137083787

Intron Length:

1771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

ATCAATTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATCAAT

U12 Branch Point Sequence:

ATTCTATCAATT

Flanking Amino Acid:

SMVSDQTAILGKNMWCPEQK

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

34.8

Major BPS

69.1

0.47

1.2

34.1

Major PPT

72.1

0.5

0.9

39.8

Minor 5ss

39.7

-1.2

2.8

46.7

43.9

Minor BPS

51.4

0.12

1.8

73.31

37.3

Associated Gene:

Gene:

CENPJ

Ensembl Gene ID:

ENSAPLG00000004962

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022078

137071032 - 137086603

15572

ENSAPLT00000005118

137063995 - 137086603

22609