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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137083912_137085428_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137083912 - 137085428

Intron Length:

1517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAAAA

5'SS Class:

major

3'SS Sequence:

TTTGTTTGAAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

TTTGTTTGAAAA

Flanking Amino Acid:

CDPLLQKLEQLKELQQQKQE

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.1

76.9

33.7

Major BPS

65.7

0.39

71.3

30.3

Major PPT

64.5

0.33

1.2

41.6

Minor 5ss

38.3

-1.3

2.9

48.8

46.9

Minor BPS

54.6

0.14

1.6

68.73

37.7

Associated Gene:

Gene:

CENPJ

Ensembl Gene ID:

ENSAPLG00000004962

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022078

137071032 - 137086603

15572

ENSAPLT00000005118

137063995 - 137086603

22609