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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137085949_137086452_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

137085949 - 137086452

Intron Length:

504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

GCTTCATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTGTATATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.56

0.9

66.2

39.8

Minor 5ss

38.7

-1.3

2.8

49.1

46.7

Minor BPS

49.9

0.07

2.2

80.49

41.6

Associated Gene:

Gene:

CENPJ

Ensembl Gene ID:

ENSAPLG00000004962

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005118

137063995 - 137086603

22609