Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_137094704_137095632_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137094704 - 137095632

Intron Length:

929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGTATA

5'SS Class:

major

3'SS Sequence:

GTTTTGATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

AATATTTTACCA

Flanking Amino Acid:

DILNQWPDRHGLEDLSSSEN

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

78.4

37.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

80.5

0.69

0.9

74.1

40.3

Minor 5ss

38.4

-1.3

3.1

51.2

45.5

Minor BPS

53.3

0.1

1.6

63.01

37.2

Associated Gene:

Gene:

PARP4

Ensembl Gene ID:

ENSAPLG00000005053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034650

137088187 - 137136486

48300

ENSAPLT00000020325

137089356 - 137136486

47131

ENSAPLT00000005279

137088187 - 137137207

49021

ENSAPLT00000005273

137088187 - 137136486

48300