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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137113717_137115374_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137113717 - 137115374

Intron Length:

1658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

CTTCCCTGGACC

Flanking Amino Acid:

VCVRQIKTVKNGFSLDMSIE

Intron Amino Acid Position:

801

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

34.8

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

82.1

0.72

0.8

80.5

31.5

Minor 5ss

42.3

-0.9

2.8

52.9

38.3

Minor BPS

63.7

0.41

1.5

72.41

38.7

Associated Gene:

Gene:

PARP4

Ensembl Gene ID:

ENSAPLG00000005053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020325

137089356 - 137136486

47131

ENSAPLT00000005279

137088187 - 137137207

49021

ENSAPLT00000005273

137088187 - 137136486

48300

ENSAPLT00000034650

137088187 - 137136486

48300