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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137117975_137118210_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137117975 - 137118210

Intron Length:

236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATATTTTAATG

Flanking Amino Acid:

QNVNVVKFGTNFIEFSPFSK

Intron Amino Acid Position:

940

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

81.1

26.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.2

0.77

0.8

79.1

32.9

Minor 5ss

-1

2.9

52.8

38.5

Minor BPS

59.7

0.17

1.3

59.06

Associated Gene:

Gene:

PARP4

Ensembl Gene ID:

ENSAPLG00000005053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020325

137089356 - 137136486

47131

ENSAPLT00000005279

137088187 - 137137207

49021

ENSAPLT00000005273

137088187 - 137136486

48300

ENSAPLT00000034650

137088187 - 137136486

48300