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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137168636_137194135_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137168636 - 137194135

Intron Length:

25500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAACGTAT

5'SS Class:

major

3'SS Sequence:

CTTTATTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

GTCTCTTTATTT

Flanking Amino Acid:

TPMMPDNGTVVIIKMLKCR*

Intron Amino Acid Position:

594

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.2

68.3

39.1

Major BPS

83.9

0.84

73.9

41.3

Major PPT

0.81

0.7

84.8

29.6

Minor 5ss

44.1

-0.6

3.3

60.9

46.1

Minor BPS

63.5

0.5

1.6

76.04

41.4

Associated Gene:

Gene:

PSPC1

Ensembl Gene ID:

ENSAPLG00000006246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006493

137168535 - 137229738

61204