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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137194306_137198365_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137194306 - 137198365

Intron Length:

4060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGATC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTGCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAGAT

U12 Branch Point Sequence:

TTGTTTTGCATA

Flanking Amino Acid:

MGPRGAINMGDAFSPAPAGN

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

35.1

Major BPS

71.4

0.53

39.8

Major PPT

75.1

0.56

0.9

72.4

37.8

Minor 5ss

35.4

-1.7

3.5

50.7

46.2

Minor BPS

47.9

-0.1

1.8

62.86

38.4

Associated Gene:

Gene:

PSPC1

Ensembl Gene ID:

ENSAPLG00000006246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045894

137190616 - 137229738

39123

ENSAPLT00000006493

137168535 - 137229738

61204