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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137198424_137215698_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137198424 - 137215698

Intron Length:

17275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTACTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

TGATCATGAAAA

Flanking Amino Acid:

GGFKPNFMDNREQEMRMGDM

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

85.3

25.4

Major BPS

0.57

1.2

41.2

Major PPT

85.1

0.79

0.8

82.1

34.6

Minor 5ss

37.5

-1.4

2.8

46.9

41.8

Minor BPS

51.2

0.03

1.8

65.41

39.6

Associated Gene:

Gene:

PSPC1

Ensembl Gene ID:

ENSAPLG00000006246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045894

137190616 - 137229738

39123

ENSAPLT00000006493

137168535 - 137229738

61204