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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137216801_137221782_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137216801 - 137221782

Intron Length:

4982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAACC

5'SS Class:

strong_major

3'SS Sequence:

TTAATCCTGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACATTTTTAATC

Flanking Amino Acid:

HEHQLMLMRQDLMRRQEELR

Intron Amino Acid Position:

453

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.9

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.2

0.39

66.9

40.1

Minor 5ss

34.1

-1.8

44.4

43.1

Minor BPS

65.2

0.46

1.2

64.51

35.6

Associated Gene:

Gene:

PSPC1

Ensembl Gene ID:

ENSAPLG00000006246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045894

137190616 - 137229738

39123

ENSAPLT00000006493

137168535 - 137229738

61204