Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_137291541_137292821_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

137291541 - 137292821

Intron Length:

1281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

TTTTCCTCAAAC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.9

90.9

28.7

Major BPS

73.1

0.58

73.8

32.3

Major PPT

74.1

0.54

0.9

70.6

33.9

Minor 5ss

41.2

-1

2.9

52.2

44.4

Minor BPS

0.73

1.6

84.51

33.8

Associated Gene:

Gene:

ZMYM2

Ensembl Gene ID:

ENSAPLG00000006675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045795

137272387 - 137357995

85609

ENSAPLT00000006992

137272387 - 137357995

85609

ENSAPLT00000047039

137272387 - 137305759

33373