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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137323657_137334785_F


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
137323657 - 137334785

Intron Length:
11129

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATGTATG

5'SS Class:
strong_major

3'SS Sequence:
AATCTGTTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTAAA

U12 Branch Point Sequence:
TTGTTCCTAATA

Flanking Amino Acid:
SGIKRPFCSEGCKLLYKQDF

Intron Amino Acid Position:
596

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.4
0.93
0.8
83.5
35.1

Major BPS
81.6
0.78
0.8
82
24.9

Major PPT
75.8
0.58
1
65.9
44.5

Minor 5ss
45.4
-0.5
2.5
59.2
45.4

Minor BPS
65.1
0.47
1.6
75.4
36.3

Associated Gene:

Gene:
ZMYM2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

137272387 - 137357995
85609

137272387 - 137357995
85609