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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137346337_137347162_F


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
137346337 - 137347162

Intron Length:
826

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATTTTTT

5'SS Class:
strong_major

3'SS Sequence:
AATATATTTTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTAAT

U12 Branch Point Sequence:
TTTCTGTTAATA

Flanking Amino Acid:
DLDIEIDFPRATEELDTENE

Intron Amino Acid Position:
896

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.8
0.73
1
82.4
30.8

Major BPS
84.4
0.85
1
84
34.5

Major PPT
75.5
0.57
1
70.9
43.5

Minor 5ss
58.1
0.27
2.3
76
39.6

Minor BPS
60.8
0.33
2
76.1
35.4

Associated Gene:

Gene:
ZMYM2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

137272387 - 137357995
85609

137272387 - 137357995
85609