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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137349650_137353975_F


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
137349650 - 137353975

Intron Length:
4326

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTTAGTAGA

5'SS Class:
strong_major

3'SS Sequence:
CTCTTCTCTGTAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTGTAAA

U12 Branch Point Sequence:
TTGTCTGTTACT

Flanking Amino Acid:
IYYLCLGIQEYLYGSNRKDN

Intron Amino Acid Position:
1035

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84
0.8
1.1
79.2
36.3

Major BPS
75.2
0.63
1.1
75.9
36.3

Major PPT
81.3
0.7
0.7
77.1
25

Minor 5ss
31.5
-2.1
2.4
34.9
40.7

Minor BPS
53.2
0.18
2.3
79.44
43

Associated Gene:

Gene:
ZMYM2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

137272387 - 137357995
85609

137272387 - 137357995
85609