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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137355412_137355791_F


Intron Information:

Intron Rank:
23

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
137355412 - 137355791

Intron Length:
380

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTATGA

5'SS Class:
major

3'SS Sequence:
TTTCTTCTTAAAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AAGTTAT

U12 Branch Point Sequence:
TTCTTCTTAAAG

Flanking Amino Acid:
VSSLCRADSEDKITTGKRKH

Intron Amino Acid Position:
1157

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.6
0.49
1.1
61.7
39.7

Major BPS
64.7
0.37
1.2
55.4
41.7

Major PPT
81.1
0.7
0.9
82.5
26.7

Minor 5ss
36.3
-1.6
3.2
48.5
47

Minor BPS
71.1
0.52
1.5
72.05
40.8

Associated Gene:

Gene:
ZMYM2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

137272387 - 137357995
85609

137272387 - 137357995
85609