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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137355913_137357802_F


Intron Information:

Intron Rank:
24

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
137355913 - 137357802

Intron Length:
1890

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATGTATG

5'SS Class:
strong_major

3'SS Sequence:
TTCTACCTTGTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAC

U12 Branch Point Sequence:
GTTATTCTAACT

Flanking Amino Acid:
VKMFECYLSKSPQNLNQRTD

Intron Amino Acid Position:
1197

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.4
0.93
0.8
83.5
35.1

Major BPS
84.6
0.86
0.8
83.9
22.3

Major PPT
79.2
0.66
0.8
73.9
30.8

Minor 5ss
45.4
-0.5
2.5
59.2
45.4

Minor BPS
58.7
0.35
1.7
77.87
38.2

Associated Gene:

Gene:
ZMYM2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

137272387 - 137357995
85609

137272387 - 137357995
85609