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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137540738_137542988_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137540738 - 137542988

Intron Length:

2251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ACTTTATTAATT

Flanking Amino Acid:

MESSQVAVIGSGLIGRSWAM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.1

39.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

0.85

0.7

85.4

28.4

Minor 5ss

27.9

-2.5

3.2

39.3

46.1

Minor BPS

66.1

0.58

1.5

78.9

37.5

Associated Gene:

Gene:

CRYL1

Ensembl Gene ID:

ENSAPLG00000002489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038763

137484353 - 137543757

59405

ENSAPLT00000002519

137484353 - 137543757

59405