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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137554920_137556041_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137554920 - 137556041

Intron Length:

1122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

GTTCATTTAATA

Flanking Amino Acid:

MGRPTTGAIQDGVSRPMTAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

27.5

Major BPS

90.7

1.01

0.7

19.9

Major PPT

78.4

0.64

82.6

32.8

Minor 5ss

38.8

-1.3

3.2

57.6

46.6

Minor BPS

62.7

0.39

1.5

70.67

35.2

Associated Gene:

Gene:

IFT88

Ensembl Gene ID:

ENSAPLG00000002720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002830

137550154 - 137596961

46808