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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137561146_137561854_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137561146 - 137561854

Intron Length:

709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCCATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATACAT

U12 Branch Point Sequence:

ACATGCATAATT

Flanking Amino Acid:

DDDDKYISTNDDPHTNLLIE

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

80.8

34.4

Major BPS

62.6

0.31

1.1

70.6

34.3

Major PPT

72.2

0.5

0.9

62.9

38.7

Minor 5ss

46.2

-0.4

2.8

62.9

41.8

Minor BPS

49.5

0.04

68.03

Associated Gene:

Gene:

IFT88

Ensembl Gene ID:

ENSAPLG00000002720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002830

137550154 - 137596961

46808